Package: NGLVieweR 1.3.4
NGLVieweR: Interactive 3D Visualization of Molecular Structures
Provides an 'htmlwidgets' <https://www.htmlwidgets.org/> interface to 'NGL.js' <http://nglviewer.org/ngl/api/>. 'NGLvieweR' can be used to visualize and interact with protein databank ('PDB') and structural files in R and Shiny applications. It includes a set of API functions to manipulate the viewer after creation in Shiny.
Authors:
NGLVieweR_1.3.4.tar.gz
NGLVieweR_1.3.4.zip(r-4.5)NGLVieweR_1.3.4.zip(r-4.4)NGLVieweR_1.3.4.zip(r-4.3)
NGLVieweR_1.3.4.tgz(r-4.4-any)NGLVieweR_1.3.4.tgz(r-4.3-any)
NGLVieweR_1.3.4.tar.gz(r-4.5-noble)NGLVieweR_1.3.4.tar.gz(r-4.4-noble)
NGLVieweR_1.3.4.tgz(r-4.4-emscripten)NGLVieweR_1.3.4.tgz(r-4.3-emscripten)
NGLVieweR.pdf |NGLVieweR.html✨
NGLVieweR/json (API)
NEWS
# Install 'NGLVieweR' in R: |
install.packages('NGLVieweR', repos = c('https://nvelden.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nvelden/nglviewer/issues
nglnglviewerpdbprotein-data-bankshinyshiny-applications
Last updated 1 years agofrom:811b4e159d. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 24 2024 |
R-4.5-win | OK | Oct 24 2024 |
R-4.5-linux | OK | Oct 24 2024 |
R-4.4-win | OK | Oct 24 2024 |
R-4.4-mac | OK | Oct 24 2024 |
R-4.3-win | OK | Oct 24 2024 |
R-4.3-mac | OK | Oct 24 2024 |
Exports:%>%addRepresentationaddSelectionfile_extNGLVieweRNGLVieweR_exampleNGLVieweR_proxyNGLVieweROutputremoveSelectionrenderNGLVieweRselectionParameterssetFocussetPositionsetQualitysetRocksetRotationsetScalesetSpinsnapShotstageParametersupdateColorupdateFocusupdateFullscreenupdateRepresentationupdateRockupdateSelectionupdateSpinupdateStageupdateVisibilityupdateZoomMovezoomMove
Dependencies:base64encbslibcachemclicommonmarkcrayondigestevaluatefastmapfontawesomefsgluehighrhtmltoolshtmlwidgetshttpuvjquerylibjsonliteknitrlaterlifecyclemagrittrmemoisemimepromisesR6rappdirsRcpprlangrmarkdownsassshinysourcetoolstinytexwithrxfunxtableyaml
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Add representation | addRepresentation |
Add a selection | addSelection |
Create a NGLVieweR | NGLVieweR |
Run NGLVieweR example Shiny app | NGLVieweR_example |
Shiny bindings for NGLVieweR | NGLVieweR-shiny NGLVieweROutput NGLVieweR_proxy renderNGLVieweR |
Remove a selection | removeSelection |
Set selection parameters | selectionParameters |
Set Focus | setFocus |
Set Position | setPosition |
Set Quality | setQuality |
Set rock | setRock |
Rotate View | setRotation |
Set Scale | setScale |
Set Spin | setSpin |
Snapshot | snapShot |
Set stage parameters | stageParameters |
Update color of a selection | updateColor |
Update Focus | updateFocus |
Fullscreen | updateFullscreen |
Update Representation | updateRepresentation |
Update Rock | updateRock |
Update a selection | updateSelection |
Update Spin | updateSpin |
Update Stage | updateStage |
Update visibility | updateVisibility |
Update zoomMove | updateZoomMove |
Set zoomMove | zoomMove |